YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|1657545, gi\|7...
Organism:	Escherichia coli
Length:	309 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|1657545, gi|7....

Description	E-value	Query Range	Subject Range
gi\|13359861 - gi\|13359861\|dbj\|BAB33827.1\| 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase [Escherichia coli O15... gi\|209744612, gi... - pir\|\|H85529 hypothetical protein mhpC [imported] - Escherichia coli (strain O157:H7, substrain EDL9... gi\|12513185, gi\|... - gi\|15800080\|ref\|NP_286092.1\| 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase [Escherichia coli O1... gi\|13359861 - gi\|13359861\|dbj\|BAB33827.1\| 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase [Escherichia coli O15...	249.0	[0..1]	[308..1]
gi\|1665748 - gi\|1665748\|dbj\|BAA13054.1\| MhpC [Escherichia coli] gi\|1665748 - gi\|1665748\|dbj\|BAA13054.1\| MhpC [Escherichia coli W3110]	232.0	[0..17]	[309..1]
gi\|75256729 - gi\|75256729\|ref\|ZP_00728334.1\| COG0596: Predicted hydrolases or acyltransferases (alpha/beta hydrola... gi\|75208393 - gi\|75208393\|ref\|ZP_00708729.1\| COG0596: Predicted hydrolases or acyltransferases (alpha/beta hydrola...	232.0	[0..17]	[309..1]
gi\|188492410, gi... - gi\|75512413\|ref\|ZP_00734952.1\| COG0596: Predicted hydrolases or acyltransferases (alpha/beta hydrola...	232.0	[0..17]	[309..1]
MHPC_ECO8A - 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli O8 (str... MHPC_ECO55 - 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli (strain... gi\|75227295 - gi\|75227295\|ref\|ZP_00714084.1\| COG0596: Predicted hydrolases or acyltransferases (alpha/beta hydrola... MHPC_ECOHS - 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli O9:H4 (... MHPC_ECOSE - 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli (strain... MHPC_ECO24 - 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli O139:H2... gi\|83585727 - gi\|83585727\|ref\|ZP_00924369.1\| COG0596: Predicted hydrolases or acyltransferases (alpha/beta hydrola... MHPC_ECO7I - 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli O7:K1 (... MHPC_ECOLU - 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli O17:K52... gi\|253972323, gi... - gi\|254160422\|ref\|YP_003043530.1\| 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase [Escherichia col... gi\|242376135, gi... - gi\|251783862\|ref\|YP_002998166.1\| hypothetical protein B21_00307 [Escherichia coli BL21], gi\|24237613... gi\|254287225, gi... - gi\|254287225\|ref\|YP_003052973.1\| 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase [Escherichia col...	232.0	[0..17]	[309..1]
gi\|1702883\|emb\|C... - 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase [Escherichia coli] gi\|61680029, gi\|... - gi\|61680032\|pdb\|1U2E\|D Chain D, Crystal Structure Of The C-C Bond Hydrolase Mhpc, gi\|61680031\|pdb\|1U...	228.0	[0..21]	[309..1]
gi\|38703860 - gi\|38703860\|ref\|NP_308431.2\| 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase [Escherichia coli O1... gi\|254791530, gi... - gi\|254791530\|ref\|YP_003076367.1\| 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase [Escherichia col... MHPC_ECO57 - 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli O157:H7...	228.0	[0..17]	[308..1]
MHPC_BURVG - 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Burkholderia vietnamiens...	217.0	[0..21]	[308..1]
MHPC1_DECAR - 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase 1 OS=Dechloromonas aromatic...	213.0	[0..22]	[306..3]

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Predicted Domain #1

Region A:
Residues: [1-309]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDCRIWLVKR QNRELNMQEK MMSYQPQTEA ATSRFLNVEE AGKTLRIHFN DCGQGDETVV  60
   61 LLHGSGPGAT GWANFSRNID PLVEAGYRVI LLDCPGWGKS DSVVNSGSRS DLNARILKSV 120
  121 VDQLDIAKIH LLGNSMGGHS SVAFTLKWPE RVGKLVLMGG GTGGMSLFTP MPTEGIKRLN 180
  181 QLYRQPTIEN LKLMMDIFVF DTSDLTDALF EARLNNMLSR RDHLENFVKS LEANPKQFPD 240
  241 FGPRLAEIKA QTLIVWGRND RFVPMDAGLR LLSGIAGSEL HIFRDCGHWA QWEHADAFNQ 300
  301 LVLNFLARP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	60.0
Match:	1u2eA
Description:	Crystal Structure of the C-C bond hydrolase MhpC
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits