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View Structure Prediction Details

Protein: CE37740
Organism: Caenorhabditis elegans
Length: 313 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37740.

Description E-value Query
Range
Subject
Range
gi|60468186 - gi|60468186|gb|EAL66196.1| hypothetical protein DDB0204910 [Dictyostelium discoideum]
gi|66812030, gi|... - gi|66812030|ref|XP_640194.1| hypothetical protein [Dictyostelium discoideum AX4], gi|60468186|gb|EAL...
148.0 [0..2] [266..241]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVLKLGFCL IITLFKSGSI KKTCHELHKT IWQNRLETMK VAVPAVVYAI QNNLYYIALA  60
   61 NVDPTTYSVT LQIRILTTAA LSVCLLNKKL SWYQWGAQVM ALLGVVIVQL DKTNSHKEA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.12
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #2
Region A:
Residues: [120-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGNFWIGVSA VVGMCWTSAF AGVYFEKMLK NSSADVWIQN IRLSILTLFF AGITMITTDG  60
   61 EAVFGGRMFE GWSNMVWLVT ILNSVGGLCI SLVMKYADNV MKTYCQSIAI GLTSLVSICL 120
  121 GERILTVYLV YGVTLVTSSV VVYSLFPVAP PALSDYHKLE QQDDVAELLK SSGVEDEEEE 180
  181 EDEIFGELEH KIEL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 33.552842
Match: PF04142.6
Description: No description for PF04142.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle