| Protein: | aat-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 537 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aat-5.
| Description | E-value | Query Range |
Subject Range |
|
|
307.0 | [0..5] | [382..975] |
|
Region A: Residues: [1-381] |
1 11 21 31 41 51
| | | | | |
1 MDESHKMGFL GATSYVIGNI IGSGIFITPA SILRNVDSIG LSLLIWVLCA VIAILGAICY 60
61 IELGTSIREA GCDFAYICYV KWYSIAFAFM WVSVLMTYPA TIAICAETFG QYLIEGLKQY 120
121 YEIDDALVPT CQKLFAYSLL FLVTWMNFFE LSKFAARFQI LATIAKLFSC MLIIGTGFYF 180
181 YFVKGWHGYL ENPMQGSKYG TGNLILGFYG GLWAFSGWDV LNYSTGEIKH PKRNVPFALL 240
241 TGISVVTAIY VAINVAYFVV LDVETVKQSD AVAAIFSRET LGDFANVVPF LIGILLIGSL 300
301 NSNLFSGSRY MYAAARQGHL PACFSCVNTE TESPRVAVLA QSVLALVISY IGDLDTLITY 360
361 VMFGFWAQRI FSLVALLIIR H
|
| Detection Method: |  |
| Confidence: | 1.22 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [382-455] |
1 11 21 31 41 51
| | | | | |
1 NHIPVHPDAV RVPLFCIYLF LAITVALVII PIFYEFQSTA LAIAICLFGF VLYYVFIHKA 60
61 IFPRWLVALN KKVT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [456-537] |
1 11 21 31 41 51
| | | | | |
1 LWCCILFDCL PDVKGGVQLL ASDSSQALLS ERLSSTRLSD DSFPDLHSDE KNIMRRNGSA 60
61 AGLKMLISSV PSSLVDLISD VQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
