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View Structure Prediction Details

Protein: CE37764
Organism: Caenorhabditis elegans
Length: 484 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37764.

Description E-value Query
Range
Subject
Range
MURE_CALS4 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase OS=Caldanaerobacter subterrane...
MURE_THETN - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase OS=Thermoanaerobacter tengcong...
335.0 [0..2] [466..40]

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Predicted Domain #1
Region A:
Residues: [1-484]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEKAVPCY EESVRLLNGL QSNAATIKKL RVQRENLQAI NLPQCRKYLE SLNISAEDLN  60
   61 ALNIIHVSGT KGKGSACAFV ESILRSQGLR TGFYSSPHLV HVRERIQVDG QPVSEQMFAE 120
  121 EFFHVYDIIK REHSDNMPAY FKFLTLLAFR IFVKLNVQVM ILEVGIGGEY DCTNVVEKPK 180
  181 VCGVTTLDYD HMSILGNKLS EIAWHKAGIF KESVPAFYSP TTTEAEEVLI ARAISKHVPL 240
  241 FQTPPVSAYQ FARDISPGIR GAHQFSNVSM ALQLVRAWAE KCGFPLPGVP LSTDTSGFNV 300
  301 PLWMCDAIES CRWPGRSQIV STDRNVTYLL DGAHTPKSME ACSEWAAEEI VNLKKENVKK 360
  361 ILLFQCTADR CPSTLIKYLK PLGISQIVSC PTQLHSSIDK SADSANLNAS RDEQAEKANQ 420
  421 CVQAWKESLD QPESVTEDQM KVFDCISSAY KFIESQAASQ EILVLVTGSL HLVGGVLNLA 480
  481 GKGK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.522879
Match: 1w78A
Description: E.coli FolC in complex with DHPP and ADP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle