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View Structure Prediction Details

Protein: acs-1
Organism: Caenorhabditis elegans
Length: 597 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acs-1.

Description E-value Query
Range
Subject
Range
gi|89092350, gi|... - gi|89092350|ref|ZP_01165304.1| acyl-CoA synthase [Oceanospirillum sp. MED92], gi|89083438|gb|EAR6265...
553.0 [0..25] [586..4]

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Predicted Domain #1
Region A:
Residues: [1-597]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYEEPISLE EAALNANDVM VAPSRKSYVH GCSTVPLLFE TVGDRLRSAV DQVPDKEFLI  60
   61 FKREGIRKTY SQVATDAENL ACGLLHLGLK KGDRIGIWGP NTYEWTTTQF ASALAGMVLV 120
  121 NINPSYQSEE LRYAIEKVGI RALITPPGFK KSNYYQSIKD ILPEVTLKEP GKSGITSRNF 180
  181 TCFQHLIMFD EEDKIYPGAW KYTDVMKMGT EEDRHHLSKI ERETQPDDSL NIQYTSGTTG 240
  241 QPKGATLTHH NVLNNAFFVG LRAGYSEKKT IICIPNPLYH CFGCVMGVLA ALTHLQTCVF 300
  301 PAPSFDALAA LQAIHEEKCT ALYGTPTMFI DMINHPEYAN YNYDSIRSGF IAGAPCPITL 360
  361 CRRLVQDMHM TDMQVCYGTT ETSPVSFMST RDDPPEQRIK SVGHIMDHLE AAIVDKRNCI 420
  421 VPRGVKGEVI VRGYSVMRCY WNSEEQTKKE ITQDRWYHTG DIAVMHDNGT ISIVGRSKDM 480
  481 IVRGGENIYP TEVEQFLFKH QSVEDVHIVG VPDERFGEVV CAWVRLHESA EGKTTEEDIK 540
  541 AWCKGKIAHF KIPRYILFKK EYEFPLTVTG KVKKFEIREM SKIELGLQQV VSHFSEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 154.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle