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View Structure Prediction Details

Protein: gi|108705991, gi...
Organism: Oryza sativa Japonica Group
Length: 555 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108705991, gi....

Description E-value Query
Range
Subject
Range
gi|15290605, gi|... - gi|218192015|gb|EEC74442.1| hypothetical protein OsI_09833 [Oryza sativa Indica Group], gi|15290605|...
849.0 [0..1] [555..1]

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Predicted Domain #1
Region A:
Residues: [1-126]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGGGGRAL PETPTWAVAV VCAVIVLVSV AMEHGLHKLG HWFHKREKKA MGEALEKIKA  60
   61 ELMLLGFISL LLTVAQTPIS KICIPESAAN IMLPCKAGQD IVKGLKGKKD HRRRLLWYTG 120
  121 EEESHR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [127-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSLAGAAGED YCAQSGKVAL MSSGGMHQLH IFIFVLAVFH VTYCVITMAL GRLKMKKWKK  60
   61 WELETNSLEY QFANDPSRFR FTHQTSFVKR HLGLSSTPGL RWIVAFFRQF FGSVTKVDYL 120
  121 TMRQGFINAH LSQNSKFDFH KYIKRSLEDD FKVVVGISLP LWFVAILVLF LDIQGFGTLI 180
  181 WISFVPLVIL MLVGTKLEMV IMEMAQEIQD RATVIKGAPV VEPSNKYFWF NRPDWVLFFI 240
  241 HLILFQNAFQ MAHFVWTLAT PGLKKCFHEN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [397-555]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSIMKVVV GIFIQFLCSY STFPLYALVT QMGSNMKKTI FEEQTMKALM NWRKTAREKK  60
   61 KLRDADEFLA QMSGDTTPSR GSSPVHLLHK QRVRSEDPPS APASPGFAGE ARDMYPVPVA 120
  121 PVVRPHGFNR MDPDKRRAAS SSAIQVDIAD SDFSFSVQR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle