YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|15896180, gi\|...
Organism:	Clostridium acetobutylicum ATCC 824
Length:	275 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15896180, gi|....

Description	E-value	Query Range	Subject Range
gi\|27886451, gi\|... - gi\|34763775\|ref\|ZP_00144691.1\| Dihydroneopterin aldolase; 2-amino-4-hydroxy-6-hydroxymethyldihydropt...	323.0	[0..1]	[274..1]
gi\|19703424, gi\|... - gi\|19713498\|gb\|AAL94285.1\| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Fuso...	319.0	[0..1]	[274..1]
gi\|82722943, gi\|... - gi\|82749218\|ref\|ZP_00911682.1\| 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK:Dihydroneop...	312.0	[0..1]	[274..1]
gi\|18144683, gi\|... - gi\|18310004\|ref\|NP_561938.1\| dihydroneopterin aldolase/ 2-amino-4-hydroxy-6-hydroxymethyldihydropter...	310.0	[0..1]	[273..1]
gi\|110682789, gi... - gi\|110802288\|ref\|YP_698421.1\| dihydroneopterin aldolase/ 2-amino-4-hydroxy-6-hydroxymethyldihydropte...	309.0	[0..1]	[273..1]
gi\|110798735, gi... - gi\|110798735\|ref\|YP_695723.1\| dihydroneopterin aldolase/ 2-amino-4-hydroxy-6-hydroxymethyldihydropte...	308.0	[0..1]	[273..1]
gi\|23336230, gi\|... - gi\|23336230\|ref\|ZP_00121455.1\| COG0801: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Bifidob...	300.0	[0..1]	[271..1]
gi\|23466233, gi\|... - gi\|23466233\|ref\|NP_696836.1\| SulD [Bifidobacterium longum NCC2705], gi\|23326978\|gb\|AAN25472.1\| SulD ...	297.0	[0..1]	[271..1]
gi\|88911852, gi\|... - gi\|88932216\|ref\|ZP_01137908.1\| 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK:Dihydroneop...	292.0	[0..3]	[272..20]
gi\|110590954, gi... - pir\|\|E97905 dihydroneopterin aldolase (EC 4.1.2.25) [imported] - Streptococcus pneumoniae (strain R6... SULD_STRR6 - Bifunctional folate synthesis protein OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=sulD... gi\|116517074, gi... - gi\|116517074\|ref\|YP_815790.1\| bifunctional folate synthesis protein [Streptococcus pneumoniae D39], ...	291.0	[0..1]	[271..1]

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Predicted Domain #1

Region A:
Residues: [1-275]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKITIEDLE IFANHGVLGE EKVLGQKFLL SLYLTLDLRK PGLSKTLSDT VNYAELSDRV  60
   61 EEEFQRENFD LIETAAEKVA EFILLNYDLI QSVKVILKKP WAPVKKHLKY VSVEIERSWH 120
  121 TVYIGLGSNI ADKSQNLKDA LKIIDDNYLC KITKTSNFYT TRPVGYLNQD NFLNCAAEVK 180
  181 TLMTPNELMD FFLETEKSLK RERKIHWGPR TIDIDILLYD DLVTYDPHCT IPHPRMAERL 240
  241 FVITPLCDIN PYLVHPISNK RLINIKNVLS KTQSL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	78.69897
Match:	2cg8A
Description:	No description for 2cg8A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits