YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|25330061
Organism:	Clostridium acetobutylicum
Length:	146 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25330061.

Description	E-value	Query Range	Subject Range
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	150.0	[0..1]	[145..1]
gi\|167039151, gi... - gi\|167039151\|ref\|YP_001662136.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp.... gi\|76797381, gi\|... - gi\|76797381\|ref\|ZP_00779704.1\| Ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter ethan... gi\|241884906, gi... - gi\|241902652\|ref\|ZP_04787384.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter broc... gi\|242230040, gi... - gi\|242258437\|ref\|ZP_04803241.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp. ...	142.0	[0..2]	[145..1]
gi\|219992356, gi... - gi\|89210568\|ref\|ZP_01188956.1\| Ribosomal-protein-alanine acetyltransferase [Halothermothrix orenii H...	137.0	[0..2]	[145..1]
gi\|146295284, gi... - gi\|82500547\|ref\|ZP_00885956.1\| Ribosomal-protein-alanine acetyltransferase [Caldicellulosiruptor sac...	136.0	[0..5]	[144..6]
gi\|110682543, gi... - gi\|110802042\|ref\|YP_699441.1\| ribosomal-protein-alanine acetyltransferase [Clostridium perfringens S... gi\|170662860, gi... - gi\|170662860\|gb\|EDT15543.1\| ribosomal-protein-alanine acetyltransferase [Clostridium perfringens E s... gi\|169297711, gi... - gi\|169344252\|ref\|ZP_02865234.1\| ribosomal-protein-alanine acetyltransferase [Clostridium perfringens...	135.0	[0..1]	[146..1]
gi\|170711799, gi... - gi\|170711799\|gb\|EDT23981.1\| ribosomal-protein-alanine acetyltransferase [Clostridium perfringens B s... gi\|110798748, gi... - gi\|110798748\|ref\|YP_696845.1\| ribosomal-protein-alanine acetyltransferase [Clostridium perfringens A...	134.0	[0..1]	[146..1]
gi\|18311148, gi\|... - gi\|18311148\|ref\|NP_563082.1\| ribosomal-protein-alanine acetyltransferase [Clostridium perfringens st...	134.0	[0..1]	[146..1]
gi\|150015357, gi... - gi\|82747549\|ref\|ZP_00910045.1\| Ribosomal-protein-alanine acetyltransferase [Clostridium beijerincki ...	132.0	[0..2]	[144..1]
gi\|255515613 - gi\|255515613\|ref\|ZP_05383289.1\| putative ribosomal-protein-alanine acetyltransferase [Clostridium di... gi\|255648707 - gi\|255648707\|ref\|ZP_05395609.1\| putative ribosomal-protein-alanine acetyltransferase [Clostridium di... gi\|145956070, gi... - gi\|90576237\|ref\|ZP_01232702.1\| hypothetical protein CdifQ_02000170 [Clostridium difficile QCD-32g58]... gi\|254973810 - gi\|254973810\|ref\|ZP_05270282.1\| putative ribosomal-protein-alanine acetyltransferase [Clostridium di... gi\|255091197 - gi\|255091197\|ref\|ZP_05320675.1\| putative ribosomal-protein-alanine acetyltransferase [Clostridium di... gi\|255312854 - gi\|255312854\|ref\|ZP_05354437.1\| putative ribosomal-protein-alanine acetyltransferase [Clostridium di...	131.0	[0..3]	[144..11]
gi\|28204473, gi\|... - gi\|28212030\|ref\|NP_782974.1\| ribosomal-protein-alanine acetyltransferase [Clostridium tetani E88], g...	131.0	[0..2]	[146..5]

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Predicted Domain #1

Region A:
Residues: [1-146]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNLTVHTLE KDDIDSIIEI ENLCFPTPWT KESMEGELRN KFAKYVVIKN NNLVVGYGGL  60
   61 WLIIDEGHIT NIAVHPEFRG MGIGNKILEE LIKLCEKRNI PSMTLEVRIS NTIAQNLYKK 120
  121 FGFKEAGVRK KYYGDNDEDA LIMWRN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.09691
Match:	2cnmA
Description:	No description for 2cnmA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits