YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|25499786
Organism:	Clostridium acetobutylicum
Length:	232 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25499786.

Description	E-value	Query Range	Subject Range
gi\|18310999, gi\|... - gi\|18310999\|ref\|NP_562933.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens str.... gi\|110683482, gi... - gi\|110802981\|ref\|YP_699298.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens SM1...	165.0	[0..1]	[231..1]
gi\|168204744, gi... - gi\|170663676\|gb\|EDT16359.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens E str... gi\|170713180, gi... - gi\|170713180\|gb\|EDT25362.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens B str... gi\|170715526, gi... - gi\|170715526\|gb\|EDT27708.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens CPE s... gi\|110674496, gi... - gi\|110799849\|ref\|YP_696697.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens ATC... gi\|168215644, gi... - gi\|182382267\|gb\|EDT79746.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens NCTC ... gi\|182624413, gi... - gi\|182624413\|ref\|ZP_02952197.1\| diacylglycerol kinase/PAP2 family protein [Clostridium perfringens D...	164.0	[0..1]	[231..1]
gi\|28204085, gi\|... - gi\|28211643\|ref\|NP_782587.1\| diacylglycerol kinase [Clostridium tetani E88], gi\|28204085\|gb\|AAO36524...	161.0	[0..1]	[231..1]
gi\|39984272, gi\|... - gi\|39997381\|ref\|NP_953332.1\| diacylglycerol kinase, putative [Geobacter sulfurreducens PCA], gi\|3998...	151.0	[0..1]	[231..33]
gi\|150015730, gi... - gi\|82745426\|ref\|ZP_00907938.1\| Phosphoesterase, PA-phosphatase related [Clostridium beijerincki NCIM...	151.0	[0..1]	[231..1]
gi\|20807453 - gi\|20807453\|ref\|NP_622624.1\| Diacylglycerol kinase [Thermoanaerobacter tengcongensis MB4] gi\|20515978, gi\|... - gi\|20807453\|ref\|NP_622624.1\| diacylglycerol kinase [Thermoanaerobacter tengcongensis MB4], gi\|205159...	148.0	[0..1]	[230..1]
gi\|110549047, gi... - gi\|222056178\|ref\|YP_002538540.1\| diacylglycerol kinase [Geobacter sp. FRC-32], gi\|221565467\|gb\|ACM21...	145.0	[0..1]	[231..1]
gi\|77687363, gi\|... - gi\|77687363\|ref\|ZP_00802611.1\| Phosphoesterase, PA-phosphatase related:Prokaryotic diacylglycerol ki...	144.0	[0..1]	[231..1]
gi\|241883460, gi... - gi\|241904173\|ref\|ZP_04788880.1\| diacylglycerol kinase [Thermoanaerobacter brockii subsp. finnii Ako-... gi\|167037776, gi... - gi\|76797148\|ref\|ZP_00779486.1\| Phosphoesterase, PA-phosphatase related:Prokaryotic diacylglycerol ki... gi\|242231327, gi... - gi\|242257150\|ref\|ZP_04802024.1\| diacylglycerol kinase [Thermoanaerobacter sp. X513], gi\|242231327\|gb... gi\|166854224, gi... - gi\|167039984\|ref\|YP_001662969.1\| diacylglycerol kinase [Thermoanaerobacter sp. X514], gi\|166854224\|g...	140.0	[0..1]	[230..1]
gi\|148263840, gi... - gi\|88935922\|ref\|ZP_01141545.1\| Phosphoesterase, PA-phosphatase related [Geobacter uraniumreducens Rf...	139.0	[0..1]	[231..1]

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Predicted Domain #1

Region A:
Residues: [1-127]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPKKLVDSF NHALEGIIYA VRTQQNVRID LIAALVILTM CFFTNLTRVE LLIITITITM  60
   61 VISAELMNTA IEATIDLTSN YYHPLAKIAK DVAAGAVVVT AINAVIVGFI VFWDKLEPVT 120
  121 NHVIYKI

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	32.79588
Match:	PF01219.10
Description:	No description for PF01219.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [128-232]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNSNPYMIFV ILVIVCILTL IIKAIFGEGT PLRGGMPSGH STIAFSLATI ITLISPQPVV  60
   61 IILSYFLAVI VAQSRVDSKV HSSLEVVCGA VFGFLATLLL FKLFH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	11.522879
Match:	1d2tA
Description:	Bacterial acid phosphatase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits