YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|15023737, gi\|...
Organism:	Clostridium acetobutylicum ATCC 824
Length:	91 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15023737, gi|....

Description	E-value	Query Range	Subject Range
gi\|221319851 - gi\|221319851\|ref\|ZP_03601145.1\| hypothetical protein BsubsJ_14448 [Bacillus subtilis subsp. subtilis... gi\|221314929 - gi\|221314929\|ref\|ZP_03596734.1\| hypothetical protein BsubsN3_14532 [Bacillus subtilis subsp. subtili... gi\|221324131 - gi\|221324131\|ref\|ZP_03605425.1\| hypothetical protein BsubsS_14587 [Bacillus subtilis subsp. subtilis... YRDF_BACSU - Putative ribonuclease inhibitor yrdF OS=Bacillus subtilis GN=yrdF PE=3 SV=1 YRDF_BACSU - Putative ribonuclease inhibitor YrdF OS=Bacillus subtilis (strain 168) GN=yrdF PE=3 SV=1	109.0	[0..1]	[91..1]
gi\|20148764 - gi\|20148764\|gb\|AAM10782.1\| barstar [yeast mitochondrial synthetic construct] BARS_BACAM - Barstar OS=Bacillus amyloliquefaciens PE=1 SV=3 gi\|30014062 - gi\|30014062\|gb\|AAO92245.1\| barnase inhibitor [Cloning vector pHR28A10] gi\|30984053, gi\|... - gi\|30984055\|gb\|AAP41140.1\| barnase inhibitor [Cloning vector pHRBar-6], gi\|30984053\|gb\|AAP41138.1\| b...	105.0	[0..1]	[82..1]
gi\|78195069, gi\|... - gi\|78223814\|ref\|YP_385561.1\| hypothetical protein Gmet_2617 [Geobacter metallireducens GS-15], gi\|78...	104.0	[0..1]	[89..6]

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Predicted Domain #1

Region A:
Residues: [1-91]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIVTIDGKE FKDKDNLHRI LKKELKFPEY YGKNLDALWD CLTGETKMPL KIVWKNFNDS  60
   61 KGYLGQYAER TAQVLLRVEE YFNGKFKVEI Q

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Detection Method:	PSI-BLAST
Confidence:	23.154902
Match:	1a19A
Description:	Barstar (barnase inhibitor)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits