| Protein: | VRN1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 341 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VRN1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
230.0 | [0..1] | [341..1] |
|
|
215.0 | [0..1] | [339..1] |
|
|
193.0 | [0..3] | [339..18] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MPRPFFHKLI FSSTIQEKRL RVPDKFVSKF KDELSVAVAL TVPDGHVWRV GLRKADNKIW 60
61 FQDGWQEFVD RYSIRIGYLL IFRYEGNSAF SVYIFNLSHS EINYHSTGLM DSAHNHFKRA 120
121 RL
|
| Detection Method: |  |
| Confidence: | 17.0 |
| Match: | 1yelA |
| Description: | Structure of the hypothetical Arabidopsis thaliana protein At1g16640.1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [123-216] |
1 11 21 31 41 51
| | | | | |
1 FEDLEDEDAE VIFPSSVYPS PLPESTVPAN KGYASSAIQT LFTGPVKAEE PTPTPKIPKK 60
61 RGRKKKNADP EEINSSAPRD DDPENRSKFY ESAS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [217-341] |
1 11 21 31 41 51
| | | | | |
1 ARKRTVTAEE RERAINAAKT FEPTNPFFRV VLRPSYLYRG CIMYLPSGFA EKYLSGISGF 60
61 IKVQLAEKQW PVRCLYKAGR AKFSQGWYEF TLENNLGEGD VCVFELLRTR DFVLKVTAFR 120
121 VNEYV
|
| Detection Method: | |
| Confidence: | 20.221849 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
