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View Structure Prediction Details

Protein: gi|16080906, gi|...
Organism: Bacillus subtilis subsp. subtilis str. 168
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16080906, gi|....

Description E-value Query
Range
Subject
Range
ILVE1_BACSU - Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis (strain 168) GN=ilvE PE=1 SV=1
gi|221317308 - gi|221317308|ref|ZP_03598602.1| branched-chain amino acid aminotransferase [Bacillus subtilis subsp....
gi|221321572 - gi|221321572|ref|ZP_03602866.1| branched-chain amino acid aminotransferase [Bacillus subtilis subsp....
YBGE_BACSU, ILVE... - Putative branched-chain-amino-acid aminotransferase OS=Bacillus subtilis GN=ybgE PE=3 SV=1, Branched...
gi|221312375 - gi|221312375|ref|ZP_03594180.1| branched-chain amino acid aminotransferase [Bacillus subtilis subsp....
395.0 [0..4] [356..3]

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Predicted Domain #1
Region A:
Residues: [1-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKQTIRVEL TSTKKPKPDP NQLSFGRVFT DHMFVMDYAA DKGWYDPRII PYQPLSMDPT  60
   61 AMVYHYGQTV FEGLKAYVSE DDHVLLFRPE KNMERLNQSN DRLCIPQIDE EQVLEGLKQL 120
  121 VAIDKDWIPN AEGTSLYIRP FIIATEPFLG VAASHTYKLL IILSPVGSYY KEGIKPVKIA 180
  181 VESEFVRAVK GGTGNAKTAG NYASSLKAQQ VAEEKGFSQV LWLDGIEKKY IEEVGSMNIF 240
  241 FKINGEIVTP MLNGSILEGI TRNSVIALLK HWGLQVSERK IAIDEVIQAH KDGILEEAFG 300
  301 TGTAAVISPV GELIWQDETL SINNGETGEI AKKLYDTITG IQKGAVADEF GWTTEVAALT 360
  361 ESK

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Detection Method: PSI-BLAST
Confidence: 96.522879
Match: 2cogA
Description: Crystal structure of oxidized human cytosolic branched-chain aminotransferase complexed with 4-methylvalerate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle