YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FHUB_BACSU
Organism: Bacillus subtilis subsp. subtilis str. 168
Length: 384 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FHUB_BACSU.

Description E-value Query
Range
Subject
Range
gi|67987421, gi|... - gi|69285730|ref|ZP_00617069.1| transport system permease protein [Kineococcus radiotolerans SRS30216...
230.0 [0..81] [381..580]

Back

Predicted Domain #1
Region A:
Residues: [1-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFHFCSKHS IKSAEKSDIL KQQLIIIISN RKEVRQLSQH KNIRTASEEI QWTSRTYGAV  60
   61 IVLIAGLCLL CLGAFLSISL GAADIHLRTV WEAIFHYQPT KTSHQIIHDL RLPRTAAAAL 120
  121 VGALLAVSGA IMQGMTRNPL AEPSIMGVTS GSAFAVSIAF AFFPGLSAMG LVLWSFAGAG 180
  181 LGASTVMGIG MFSRGGLTPV KLALAGTAVT YFFTGISTAI AIRFDVAQDI SFWYAGGVAG 240
  241 VKWSGVQLLL IAGAVGLTLA FFIARSVTVL SLGDDLAKGL GQYTSAVKLV GMLIVVILTG 300
  301 AAVSIAGTIA FIGLIIPHIT RFLVGVDYRW IIPCSAVLGA VLLVFADIAA RLVNAPFETP 360
  361 VGALTSLIGV PFFFYLARRE RRGL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.69897
Match: 2nq2A
Description: No description for 2nq2A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle