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View Structure Prediction Details

Protein: MAEN_BACSU
Organism: Bacillus subtilis subsp. subtilis str. 168
Length: 448 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAEN_BACSU.

Description E-value Query
Range
Subject
Range
gi|51978199, gi|... - gi|52144730|ref|YP_082098.1| Na+/malate symporter [Bacillus cereus E33L], gi|51978199|gb|AAU19749.1|...
gi|228906325, gi... - gi|228906325|ref|ZP_04070210.1| Na(+)-malate symporter [Bacillus thuringiensis IBL 200], gi|22885334...
544.0 [0..1] [447..1]

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Predicted Domain #1
Region A:
Residues: [1-263]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAIPKTGTI SPEQKDSQEK NLFQKIWSWE IGVIPLPLYT VLAVIIILAA YYNELPANML  60
   61 GGFAIIMILG VFLGDIGQRI PILKDIGGPA ILSLFVPSFL VFYNVLNSTS LDAVTNLMKT 120
  121 SNFLYFYIAC LVVGSILGMN RIVLIQGFIR MFVPLVAGTI AAVAAGILVG FIFGYSAYDS 180
  181 FFFVVVPIIA GGIGEGILPL SIAYSQILGS SADVFVSQLV PAAIIGNVFA IICAALMKKL 240
  241 GDKRPDLNGN GRLVKSKKAN EIF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [264-448]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NQKEAEAKID FKLMGAGVLL ACTFFIFGGL LEKFIFIPGA ILMIISAAAV KYANILPKKM  60
   61 EEGAYQLYKF ISSSFTWPLM VGLGILFIPL DDVASVISIP FVIICISVVI AMIGSGYFVG 120
  121 KLMNMYPVES AIVTCCHSGL GGTGDVAILS ASGRMGLMPF AQISTRLGGA GTVICATVLL 180
  181 RFFTS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle