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View Structure Prediction Details

Protein: YOQW_BPSPB
Organism: Bacillus phage SPbeta
Length: 224 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOQW_BPSPB.

Description E-value Query
Range
Subject
Range
gi|17230686, gi|... - gi|17230686|ref|NP_487234.1| hypothetical protein all3194 [Nostoc sp. PCC 7120], gi|17132289|dbj|BAB...
gi|25347072 - pir||AC2205 hypothetical protein all3194 [imported] - Nostoc sp. (strain PCC 7120)
292.0 [0..1] [223..1]

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Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGRFTLFSE FDDIIEQFNI DQFLPEGEYH PSYNVAPSQN ILTIINDGSN NRLGKLRWGL  60
   61 IPPWAKDEKI GYKMINARAE TLSEKPSFRK PLVSKRCIIP ADSFYEWKRL DPKTKIPMRI 120
  121 KLKSSNLFAF AGLYEKWNTP EGNPLYTCTI ITTKPNELME DIHDRMPVIL TDENEKEWLN 180
  181 PKNTDPDYLQ SLLQPYDADD MEAYQVSSLV NSPKNNSPEL IESH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.045757
Match: 2f20A
Description: Crystal structure of the Q8A8E9_BACTIN hypothetical protein from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium target BtR8.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle