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View Structure Prediction Details

Protein: KAMA_BACSU
Organism: Bacillus subtilis subsp. subtilis str. 168
Length: 471 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KAMA_BACSU.

Description E-value Query
Range
Subject
Range
gi|2529467|gb|AA... - YokS [Bacillus subtilis]
gi|2529467 - gi|2529467|gb|AAB81159.1| YokS [Bacillus subtilis]
434.0 [0..1] [471..1]

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Predicted Domain #1
Region A:
Residues: [1-471]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKWYKPKR HWKEIELWKD VPEEKWNDWL WQLTHTVRTL DDLKKVINLT EDEEEGVRIS  60
   61 TKTIPLNITP YYASLMDPDN PRCPVRMQSV PLSEEMHKTK YDLEDPLHED EDSPVPGLTH 120
  121 RYPDRVLFLV TNQCSMYCRY CTRRRFSGQI GMGVPKKQLD AAIAYIRETP EIRDCLISGG 180
  181 DGLLINDQIL EYILKELRSI PHLEVIRIGT RAPVVFPQRI TDHLCEILKK YHPVWLNTHF 240
  241 NTSIEMTEES VEACEKLVNA GVPVGNQAVV LAGINDSVPI MKKLMHDLVK IRVRPYYIYQ 300
  301 CDLSEGIGHF RAPVSKGLEI IEGLRGHTSG YAVPTFVVDA PGGGGKIALQ PNYVLSQSPD 360
  361 KVILRNFEGV ITSYPEPENY IPNQADAYFE SVFPETADKK EPIGLSAIFA DKEVSFTPEN 420
  421 VDRIKRREAY IANPEHETLK DRREKRDQLK EKKFLAQQKK QKETECGGDS S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 102.0
Match: 2a5hA
Description: 2.1 Angstrom X-ray crystal structure of lysine-2,3-aminomutase from Clostridium subterminale SB4, with Michaelis analog (L-alpha-lysine external aldimine form of pyridoxal-5'-phosphate).
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle