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View Structure Prediction Details

Protein: YLXY_BACSU
Organism: Bacillus subtilis subsp. subtilis str. 168
Length: 319 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLXY_BACSU.

Description E-value Query
Range
Subject
Range
gi|52080277, gi|... - gi|52080277|ref|YP_079068.1| carbohydrate esterase family 4 protein, putative polysaccharide deacety...
270.0 [0..1] [319..1]

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Predicted Domain #1
Region A:
Residues: [1-319]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKKFVPFAV FLFLFFVSFE MMENPHALDY IGAMKKDTVT VTASKDPLYE ELLQKAPEYE  60
   61 VKPQNARIDK VWKSIPGYNG LKVNIEQSYK KMKQHGKFRE KDLVYSQVKP SVHLESLQPE 120
  121 PIYKGNPDKP MVAFLINVAW GNEYLEKMLP ILQKHQVKAT FFLEGNWVRN NVQLAKKIAK 180
  181 DGHEIGNHSY NHPDMSKLTT GRISEQLDKT NEQIEQTIGV KPKWFAPPSG SFRKAVIDIA 240
  241 AEKQMGTVMW TVDTIDWQKP APSVLQTRVL SKIHNGAMIL MHPTDPTAES LEALITQIKD 300
  301 KGYALGTVTE LMDETRLLK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.69897
Match: 2c1gA
Description: Structure of Streptococcus pneumoniae peptidoglycan deacetylase ( SpPgdA)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.54926008475976 bayes_pls_golite062009
deacetylase activity 1.07373873416936 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 1.04159714419468 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 0.78725677170464 bayes_pls_golite062009
hydrolase activity 0.7139390771237 bayes_pls_golite062009
mannosidase activity 0.32530435999467 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle