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View Structure Prediction Details

Protein: gi|2632378, gi|1...
Organism: Bacillus subtilis subsp. subtilis str. 168
Length: 156 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2632378, gi|1....

Description E-value Query
Range
Subject
Range
RS7_RHILO - 30S ribosomal protein S7 OS=Rhizobium loti (strain MAFF303099) GN=rpsG PE=3 SV=1
RS7_RHILO - 30S ribosomal protein S7 OS=Rhizobium loti GN=rpsG PE=3 SV=1
215.0 [0..1] [156..1]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRKGPVAKR DVLPDPIYNS KLVSRLINKM MIDGKKGKPQ TILYKSFDII KERTGNDAME  60
   61 VFEQALKNIM PVLEVKARRV GGANYQVPVE VRPERRTTLG LRWLVNYARL RGEKTMEERL 120
  121 ANEILDAANN TGAAVKKRED THKMAEANKA FAHYRW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.221849
Match: 1husA
Description: RIBOSOMAL PROTEIN S7
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 10.1836043075256 bayes_pls_golite062009
structural molecule activity 9.60531852031349 bayes_pls_golite062009
RNA binding 2.69930050072854 bayes_pls_golite062009
nucleic acid binding 1.38138936047113 bayes_pls_golite062009
binding 0.87606732735391 bayes_pls_golite062009
protein binding 0.060050417638174 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle