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View Structure Prediction Details

Protein: gi|113624513, gi...
Organism: Oryza sativa Japonica Group
Length: 187 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113624513, gi....

Description E-value Query
Range
Subject
Range
gi|115453925, gi... - gi|50901268|ref|XP_463067.1| putative peroxisomal membrane protein [Oryza sativa (japonica cultivar-...
180.0 [0..1] [186..159]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDVVAMAGQ AYMRQLQAHP LRTKAITSGV LAGCSDAIAQ KISGVPNLQR RRLLLIMLYG  60
   61 FAYAGPFGHF LHKLMDRFFK GKKGKETTAK KVLVEQLTAS PWNNMMFMMY YGLVV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [116-187]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGRPFSQVKS KLKKDYASVQ LTAWKFWPIV SWINYEYMPL QLRVLFHSFV ASCWAVFLNL  60
   61 KAARSIATSK KA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 8.508638
Match: PF04117.3
Description: No description for PF04117.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle