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View Structure Prediction Details

Protein: gi|45736098, gi|...
Organism: Oryza sativa Japonica Group
Length: 241 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45736098, gi|....

Description E-value Query
Range
Subject
Range
VA727_ARATH - Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1
219.0 [0..4] [241..2]

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Predicted Domain #1
Region A:
Residues: [1-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGNKQSLIY SFVAKGSVVL AEHTAFSGNF STIAVQCLQK LPPNTSKSTY SCDGHTFNFL  60
   61 VDRGFVFLVV ADEAVGRSVP FVFLDRVKED FMQRYGSSID EEGQHPLADD ADDDDFLLED 120
  121 RFSIAYNLDR EFGPRLKDHM LYCINHPEEI SKLSKVKAHL TEVKGIMMDN IEKILERGEK 180
  181 IELLVGKTET LQSQADSFHR HGRELRRKMW LQNLRFKLMV GGAVAALILF LWLIICGGFK 240
  241 C

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.39794
Match: 2nupC
Description: No description for 2nupC was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle