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View Structure Prediction Details

Protein: gi|113624216, gi...
Organism: Oryza sativa Japonica Group
Length: 137 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113624216, gi....

Description E-value Query
Range
Subject
Range
gi|222641852, gi... - gi|222641852|gb|EEE69984.1| hypothetical protein OsJ_29887 [Oryza sativa Japonica Group], gi|1154799...
gi|125564238 - gi|125564238|gb|EAZ09618.1| hypothetical protein OsI_31902 [Oryza sativa Indica Group]
183.0 [0..1] [135..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVRIRLARF GCRNRPFYRL MAADSRSPRD GKHLEVLGYY DPLPGKDGGK RMGLKFDRVK  60
   61 YWLSVGAQPS DPVERILYRA GILPPPPMLA MAHKGGPRDR RPIDPMTGRP LDLEGVTVVD 120
  121 DSHTPKSGDG APNEETA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.30103
Match: 1pnsP
Description: 70S ribosome functional complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle