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View Structure Prediction Details

Protein: gi|50947587, gi|...
Organism: Oryza sativa Japonica Group
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50947587, gi|....

Description E-value Query
Range
Subject
Range
gi|7485722, gi|3... - pir||T05154 hypothetical protein F18E5.80 - Arabidopsis thaliana, gi|7268943|emb|CAB81253.1| putativ...
435.0 [0..11] [386..34]

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Predicted Domain #1
Region A:
Residues: [1-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRLVTHLHR LSHRAIPSPP PSRPPTTTSL PFLLSRRLLS DDAAPPPAAD VPNKELKRRL  60
   61 ETYYGVDDEA ELPSVTEAVL ERKLADVHSE TDDELIEELR SKPLPEVRDR DFESDFEEMH 120
  121 DTDEELDNLY NARQYVEKKI KSDEFFNMDD DKWNKMIKKA VDNGHLGNMN ECENILEDML 180
  181 HWDKLLPDEI KKKVEAKFNE LGDMCEKGEL EPEQAYELFK EFEDKMVSEC TELMEAENPT 240
  241 DVDEFSKMEN KSVKLDDPPG EGPVLRWESR IVFAPGGDAW HPKNRKVKLS VTVKELGLSR 300
  301 HAFRRLREVV GNRYNSGKDE LTITSERFEH REENRKDCLR TLYAVVEDAN KANKLADDAR 360
  361 NAYVKNRLKA NAQFMERLKV KTQKLRVAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.30103
Match: 1gqeA
Description: Polypeptide chain release factor 2 (RF2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle