| Protein: | gi|42408140, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 533 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42408140, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
605.0 | [0..26] | [533..6] |
|
|
593.0 | [0..33] | [533..13] |
|
|
588.0 | [0..14] | [533..8] |
|
|
573.0 | [0..34] | [533..26] |
|
|
569.0 | [0..27] | [533..6] |
|
|
559.0 | [0..32] | [533..24] |
|
|
544.0 | [0..25] | [533..8] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MMPVRTYHHH HHHNNSNNHR LRRIIPRVLL AVFAIYAVSF AAYLLRHQSP HPHPHPAADP 60
61 ERDAVDAAGG GGGGGAVDRV RVEAPSSQKP WPRLPSFLPW TSASVRPPPK HSCEGYFGNG 120
121 FSRLVDVLP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.235 | d.58.58 | Description not found. |
| View | Download | 0.227 | a.74.1 | Cyclin-like |
| View | Download | 0.227 | a.74.1 | Cyclin-like |
| View | Download | 0.206 | a.3.1 | Cytochrome c |
| View | Download | 0.200 | a.60.1 | SAM/Pointed domain |
|
Region A: Residues: [130-248] |
1 11 21 31 41 51
| | | | | |
1 ARGGGGGGWF RCHHSETLRS SICEGGRVRL DPGLIAMSRG GEPLDQVMGR AEEEELPKYE 60
61 PGALQVEAAA KRTGPLVEAG FLDAYVPTGG IGMHTMRSLL DSGRVVPPGE LHCSQWVEE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.468 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.439 | N/A | N/A | a.4.14 | Description not found. |
| View | Download | 0.428 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.418 | N/A | N/A | c.121.1 | Ribose/Galactose isomerase RpiB/AlsB |
| View | Download | 0.409 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.345 | N/A | N/A | c.23.1 | CheY-like |
| View | Download | 0.340 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.335 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.313 | N/A | N/A | c.23.1 | CheY-like |
| View | Download | 0.290 | N/A | N/A | a.118.1 | ARM repeat |
|
Region A: Residues: [249-378] |
1 11 21 31 41 51
| | | | | |
1 PTLLVTRFEY ANLFHTITDW YSAYVSSRVT DLPNRPNVVF VDGHCKAQLE QTWEALFSNV 60
61 TYVKNFSGPV CFRHAILSPL GYETALFKGL SESFSCEGAS AESLREKPDH QKTARLSEFG 120
121 EMILASFDLL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.636 | c.10.1 | RNI-like |
| View | Download | 0.636 | c.10.1 | RNI-like |
| View | Download | 0.544 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.544 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.539 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.539 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.527 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.527 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.462 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
|
Region A: Residues: [379-533] |
1 11 21 31 41 51
| | | | | |
1 RDDILSSKTS NGLNVLFVRR EDYLAHPRHS GKVESRLSNE KEVYDAIEGW AKGQKCKINV 60
61 INGLFAHMNM KEQLRAIQEA SVVIGAHGAG LTHLVSATPD TKVLEIISSM YRRPHFALIS 120
121 HWKSLEYHAI NLPGSYARVT DVINELSNIL KGFGC
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
