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View Structure Prediction Details

Protein: gi|125603755, gi...
Organism: Oryza sativa Japonica Group
Length: 431 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125603755, gi....

Description E-value Query
Range
Subject
Range
gi|4539677, gi|2... - gi|4539677|gb|AAD22170.1|AF061282_24 patatin-like protein [Sorghum bicolor], gi|242071683|ref|XP_002...
327.0 [0..26] [429..2]

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Predicted Domain #1
Region A:
Residues: [1-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTTNQSSG SAPLTVNPVV QRAVVGAQLP TTSPCRTPKS PPPSYGSIVT VLSIDGGGVR  60
   61 GIIPGTILAS LEEKLQKLDG ADARIADYFD VIAGTSTGGL VTAMLTAPND QGRPLFAAKD 120
  121 INDFYLKHCP KIFPPRSIPI VGLFQSMAGP KYDGKYLHSV VQSLLGDKRV NETITNVVIP 180
  181 TFDIKLLQPI TFSRFDAQID VSKNALLSDV CISTSAAPTY LPGHRFQTKD KDGKPREFNL 240
  241 VDGGVAANNP TLLAMTHVSK QILLGKQDDF FPIKPADYGK FMILSLGTGT AKIEEKYDAV 300
  301 QSGKWGMINW VYHDGSSPLI DSFSQASADL VDIHASVLFQ ALHCEKSYLR IQDDELTGDT 360
  361 ASVDVSTPEN LNRLVDVGKA LLKKRACKVN LETGKNEPDM SRGTNEEELE NFAKMLSEER 420
  421 KARLQKKAFL Q

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.045757
Match: 1oxwA
Description: Patatin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.15125075554295 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle