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View Structure Prediction Details

Protein: gi|42408903, gi|...
Organism: Oryza sativa Japonica Group
Length: 535 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42408903, gi|....

Description E-value Query
Range
Subject
Range
gi|78708595, gi|... - gi|78708595|gb|ABB47570.1| Phosphofructokinase family protein, expressed [Oryza sativa (japonica cul...
545.0 [0..3] [535..1]

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Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSLKSSGS FCSTPPQWLH STRDRILYGY SHSNAKECTC KKTKRPAPLC VKATSTKVEL  60
   61 DFNDPSWKQK FQEDWDKRFN LPRITDIYDL KPR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [94-535]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTTFSLKKNR SPAGDENGTP MDKWNGYVNS DDRALLKVIK YSSPNSAGAE CIDPDCSWVE  60
   61 QWVHRAGPRK EIYYEPEEVK AAIVTCGGLC PGLNDVIRQI VFTLETYGVK NIVGIPFGYR 120
  121 GFFEKGLKEM PLSRHLVENI NLAGGSFLGV SRGGAKTSEI VDSIQARRID MLFVLGGNGT 180
  181 HAGANAIHEE CRKRKLKVSV VAVPKTIDND ILLMDKTFGF DTAVEEAQRA INSAYIEARS 240
  241 AYHGIGLVKL MGRSSGFIAM HASLSSGQVD VCLIPEVPFT LDGEYGVLRH LEHLLKTKGF 300
  301 CVVCVAEAAG QLFYVHYRSL QKSGATDASG NVILSDIGVH MQQKIKMHFK DIGVPADVKY 360
  361 IDPTYMVRAC RANASDAILC TVLGQNAVHG AFAGFSGITS CICNTHYVYL PITEVITVPK 420
  421 RVNPNSRMWH RCLTSTGQPD FH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.30103
Match: 2higA
Description: No description for 2higA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle