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View Structure Prediction Details

Protein: gi|113623864, gi...
Organism: Oryza sativa Japonica Group
Length: 566 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113623864, gi....

Description E-value Query
Range
Subject
Range
gi|60657600 - gi|60657600|gb|AAX33321.1| secondary cell wall-related glycosyltransferase family 47 [Populus tremul...
387.0 [0..90] [562..19]

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Predicted Domain #1
Region A:
Residues: [1-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTRRLLID LSSRRRLFNA GKFSTTHKKK PVLHEAVSLA GFLRCSRALV SWMVAERKMQ  60
   61 PSPAAPPAAE HRRRALLRYV VFLAVSLLAF SCWALVSSRI DGAVLAATAG GEHDDHDGII 120
  121 VRSSTQAEMP ARGGNATSRG AVEVGVGTPA AMITRQPSSG ETTTTAALAA TCDAESALLR 180
  181 VYLYDLPPEF HFGMLGWDGK AAGAAWPDVA GDPRAVPRYP GGLNLQH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [228-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVEYWLTLDI LSSTTSGDHR RRRPCTAVRV TNASLADVFL VPFFASLSYN RQSKSPHGGH  60
   61 GSGGRSDRQL QGELVRYLAR REEWRRWGGA DHLVVPHHPN SMMDARRRLS AAMFVLSDFG 120
  121 RYPPDVANLR KDVIAPYKHV VPSLGDGDSP GFEQRPVLAY FQGAIH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [394-566]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKNGGRVRQR LYQLIKDEKD VHFTYGSVRQ NGIRRATKGM ASSKFCLNIA GDTPSSNRLF  60
   61 DAIVSHCVPV IISDDIELPF EDVLDYSAFC VFVRASDAVK RGFLLHLLRG ISQEEWTAMW 120
  121 RRLKEVAHHF EYQYPSQPGD AVQMIWGAVA RKMHLVKLQL HKRGRYQRTF SES

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle