Protein: | gi|113623614, gi... |
Organism: | Oryza sativa Japonica Group |
Length: | 589 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113623614, gi....
Description | E-value | Query Range |
Subject Range |
|
322.0 | [0..132] | [589..7] |
|
321.0 | [0..129] | [586..7] |
|
317.0 | [0..128] | [585..6] |
|
317.0 | [0..132] | [589..7] |
|
315.0 | [0..128] | [586..5] |
|
314.0 | [0..129] | [584..11] |
|
314.0 | [0..128] | [587..4] |
|
311.0 | [0..128] | [585..3] |
|
309.0 | [0..129] | [586..4] |
|
309.0 | [0..128] | [584..6] |
Region A: Residues: [1-128] |
1 11 21 31 41 51 | | | | | | 1 MDSSASASAS PTAAAAADAD RYTYSPRLRW QPEVEEYFAA AYGRDRFARI SEALAHPSCY 60 61 SCIRVNTLKS STDAVMHKLM NLVDQNGLCG GINGLEIGQQ NGGEQAHEGN SVVHKCPYSG 120 121 LDNVLFVQ |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.517 | d.58.6 | Nucleoside diphosphate kinases |
View | Download | 0.505 | c.23.6 | Cobalamin (vitamin B12)-binding domain |
View | Download | 0.493 | c.49.1 | Pyruvate kinase, C-terminal domain |
View | Download | 0.482 | d.58.6 | Nucleoside diphosphate kinases |
View | Download | 0.475 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
View | Download | 0.475 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
View | Download | 0.475 | f.14.1 | Voltage-gated potassium channels |
View | Download | 0.452 | d.109.1 | Actin depolymerizing proteins |
View | Download | 0.432 | d.109.1 | Actin depolymerizing proteins |
View | Download | 0.421 | c.23.5 | Flavoproteins |
Region A: Residues: [129-589] |
1 11 21 31 41 51 | | | | | | 1 GSGPHALHYN SQPDQSIKEV IVSRKCAESV LRGAQVYIPG VLACSSHVEK GDKVAVSVAI 60 61 EQPAEDGGWT VGITRGTVLQ GLQSDAHHEE RKGLYIGQGI TAMSRSGIFR VPHGVAVEMT 120 121 ERVYKLPSFN DVLEGEIFLQ NLPSVVAARV LDPQPGERIL DMCAAPGGKT TAIAILMKDQ 180 181 GEIIALDRSH NKVMDILKLA AEMDLNCIKA YKLDALKSVR KTNEAKYIGE AGSRTDAIVT 240 241 LAEDSEPCIN KVDAGTTNAS EDSSTTSVVQ TDNKKTDDKR YVSKADLRKN LRRMRNGPGR 300 301 NNCSGGRVEN SKGFLPNSFD RVLLDAPCSA LGLRPRLFAG EETLESLRNH ATYQRRMFDQ 360 361 AVKLVHPGGV IVYSTCTINP GENEALVRYA LDKYKFLSLG SQHPKVGGPG IVGSFERSTK 420 421 KYTEEWLTKH ESQLVQRFDP SSTLDTIGFF IAKFDVGQKD D |
Detection Method: | |
Confidence: | 79.522879 |
Match: | 1sqfA |
Description: | The crystal structure of E. coli Fmu binary complex with S-Adenosylmethionine at 2.1 A resolution |
Matching Structure (courtesy of the PDB): |