| Protein: | gi|113623138, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 455 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113623138, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
213.0 | [0..14] | [454..1] |
|
Region A: Residues: [1-179] |
1 11 21 31 41 51
| | | | | |
1 MDWLSANLQV NPQVTVHGDW VSAVMPLMKL LCLTVIGLVL SNPRTQIIPK ATFKLLSKLV 60
61 FALFLPCLIF VHLGQSVTIQ NILDWWFIPV NVLISTAIGC ILGYIVALIC RPPPQFFRFT 120
121 VIMTGFGNTG NLPIAIIGSV CHTTDHPFGP GCHRKGVAYV SFAQWVAVIL VYTLVYHMM
|
| Detection Method: |  |
| Confidence: | 4.327902 |
| Match: | PF03547.9 |
| Description: | No description for PF03547.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [180-263] |
1 11 21 31 41 51
| | | | | |
1 EPPMQFYEIV GEGNEIVEEP AQISNYSRSL LHEAEWPGMA DKETEHSKTP FIARVFMSIS 60
61 GSSQNTFPDI DFAEEGTSGA GPSS
|
| Detection Method: | |
| Confidence: | 1.18 |
| Match: | 1qd7B |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [264-455] |
1 11 21 31 41 51
| | | | | |
1 PKSLRCLAEP KVVRRIRVVA EKTPIQHVLQ PPTIASLLAI VIGMVPLFKD FVFVPDAPLS 60
61 FFTDSLEILA QAVVPSVMLI LGGMLAEGPK DNALGIRTIT GIIVARLLIL PCIGIGVVLL 120
121 ADRLHLLVEE DHMYRFVLSL QYSTPSAILL GAIASLRGYA VKEASALLFW QHICAVLSLS 180
181 IYLIVYFRLL TI
|
| Detection Method: | |
| Confidence: | 5.677781 |
| Match: | PF03547.9 |
| Description: | No description for PF03547.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
