YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|37806091, gi|...
Organism: Oryza sativa Japonica Group
Length: 253 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37806091, gi|....

Description E-value Query
Range
Subject
Range
CRR6_ARATH - Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana GN=CRR6 PE=2 SV=1
334.0 [0..42] [246..37]

Back

Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATALQLPV ASSQRLTLRR FPGSGSLGRY SGLRWPVAAQ ARRAAEEGFR LRVAFNPSGN  60
   61 FDLSLSTDQD DAPQVEP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [78-253]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPPPTEGRFE IVINTDIIRT LDLSPVHEVL GDLNSLTPAQ TRNLLDRTVG FTINYEREDP  60
   61 YDVRELSEFP DIRLWFVRLD ACYPWFPVVL DWRAGELARY AAMLAPHQMS MRLGVVFNPE 120
  121 ALELFVMKKV FIVYSWLKQQ EHPKPGLKTA DMARMLGFGI GDELFDLIEK YPAGPS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 109.721246
Match: PF08847.2
Description: No description for PF08847.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle