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View Structure Prediction Details

Protein: gi|115453837, gi...
Organism: Oryza sativa Japonica Group
Length: 430 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115453837, gi....

Description E-value Query
Range
Subject
Range
gi|149021017, gi... - ref|XP_341555.1| similar to Kin protein [Rattus norvegicus], gi|157817336|ref|NP_001102999.1| antige...
381.0 [0..1] [428..1]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKHEFLTPK AIANRIKAKG LQKLRWYCQM CQKQCRDENG FKCHCMSESH QRQMQVFGQA  60
   61 PDRVVEGFSE EFLDAFLTLL RRAHRHSRIA ATVVYNEFIA DRHHVHMNST RWATLTEFVK 120
  121 FLG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 REGHCKVEDT PKGWFITYID RDSEQAVKAR LKRKRIKSDL AEDERQERMI ARQIERAQQS  60
   61 MGKTNGELGD DASPDGSEGE SGSEDEYSDS ENDHEGQEED AKEANKAAGK IAIALQRAVP 120
  121 GPKVNPLDDK PKVKFGFEEE DEVSARDKEK EELAKKKGKD AINAAEARRS ALDELMKEEE 180
  181 KAKERSNRK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [313-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DYWLCPGIVV KVMSKSLAEK GYCKQKGVVK RVIDKYVGEI EMLESKHVLR VDQDELETVI  60
   61 PQIGGLVRIV NGAYRGSNAR LLSVDTERFC AKVQVEKGLY DGKVLKAIEY EDICKIFH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.045757
Match: 2ckkA
Description: No description for 2ckkA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle