| Protein: | C3H39_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 343 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C3H39_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
164.0 | [0..2] | [339..8] |
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 MQEALLPPAH PGRFYSDFGP KPFGSGDQRL SSPNLLTNGG DLFYGCYSPF SPTRVLSPPP 60
61 PRRAASFSHC SSSSDSVVDD GDGAGAAAAT EHRLHLAHLA LQYQEMANRF ELCLSHLADA 120
121 ADEAAALRQE NAELRVANND LACRIAKFGG RQSSAIALAG DLRRLRLPKE QTVPALPPPP 180
181 QSPPAALMNP VAVPEKQAVL PKS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [204-264] |
1 11 21 31 41 51
| | | | | |
1 ISIRSTGYQK LNQGGKHRVS KPVNVGSQRV FVGIDGAEGG EHKVGVKKEE PPMGGLEFEV 60
61 Y
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [265-343] |
1 11 21 31 41 51
| | | | | |
1 NQGMFKTELC NKWEETGACP YGDQCQFAHG VAELRPVIRH PRYKTQVCRM VLAGGVCPYG 60
61 HRCHFRHSIT PADRFSFGH
|
| Detection Method: | |
| Confidence: | 19.09691 |
| Match: | 1rgoA |
| Description: | Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d |
Matching Structure (courtesy of the PDB): |
|
