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View Structure Prediction Details

Protein: gi|50932077, gi|...
Organism: Oryza sativa Japonica Group
Length: 368 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50932077, gi|....

Description E-value Query
Range
Subject
Range
gi|17065134, gi|... - pir||T01256 probable anthocyanidin synthase [imported] - Arabidopsis thaliana, gi|3335372|gb|AAC2717...
360.0 [0..1] [353..1]

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Predicted Domain #1
Region A:
Residues: [1-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAAGDGGW PEPVVRVQAL SESGAATIPD RYVRPETERP SSSSEANAVA NINIPVVDMS  60
   61 SSPGTAAAAV AEACREWGFF QAVNHGVPAA LLRRARGVWR GFFQQPMEVK QRYGNSPATY 120
  121 EGYGSRLGVD KGAILDWGDY YFLHVRPPHL LSPHKWPHLP PDLRETTTEY SEEVRRLCER 180
  181 LMAVMAVGLG VEEGRLQEAF GGREGAGVCV RVNYYPRCPQ PDLTLGLSSH SDPGGMTVLL 240
  241 VDDRVKGLQV RHAGAWVTVD PVPDAFIINV GDQIQVVTNA LYRSVEHRVV VNAAEERLSI 300
  301 ATFYNPRSDL PVAPLPELVS PERPPLYSPM TFDDYRLYIR RNGPRGKSQV DRLAAAAATI 360
  361 PNSTTTTQ

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Detection Method: PSI-BLAST
Confidence: 92.09691
Match: 1w9yA
Description: The structure of ACC oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.921320409505 bayes_pls_golite062009
binding 0.588242505102319 bayes_pls_golite062009
nucleic acid binding 0.0678642854814351 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle