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View Structure Prediction Details

Protein: gi|50932043, gi|...
Organism: Oryza sativa Japonica Group
Length: 385 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50932043, gi|....

Description E-value Query
Range
Subject
Range
gi|46110333, gi|... - gi|46110333|ref|XP_382224.1| hypothetical protein FG02048.1 [Gibberella zeae PH-1], gi|42546727|gb|E...
235.0 [0..6] [323..717]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPPAASPGR AEKQLPAPPG LARLLLSKSR RGGGGGRSRR APATSPMFVS RGRGGAGRAA  60
   61 AAAADGEPSS PKVTCIGQVR MRKGKKGKKA AAASKVAAPE KGRGYCRCLK KAFLCGGLFD 120
  121 FDRRRRPKAP SPEVVERSRR SPWVFSSRDV AVAAAPKQPD PRGEHAEEDE EMEASAGGVF 180
  181 RSLEGEEAER LGINGGGDDK EEDEEEEEEE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [211-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AELVSSATTT PPKNALLLMR CRSAPQNRSS PLTSRFPVAA APSPTKDAAA AAEIAAPSPR  60
   61 KSQKASAAAE AQHEERQEEM ASVQEQEEVR EEEEEDVDDD DDYDEEDMRC SSARPLVLPR 120
  121 CKSEPATTAA AKMAGGTAAD ATTAGCFWAN GGSSGRRRHA PAAAAAATPV ALAGH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle