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View Structure Prediction Details

Protein: gi|222632057, gi...
Organism: Oryza sativa Japonica Group
Length: 672 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222632057, gi....

Description E-value Query
Range
Subject
Range
gi|162464159, gi... - gi|20977606|gb|AAM28230.1| SET domain protein 105 [Zea mays], gi|162464159|ref|NP_001105189.1| SET d...
664.0 [0..1] [672..1]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRASNFIPG PYQELVDAKP IRSLAPMFPA PLGINVNQSS TPPLVCVTPV GQFPVGFGSG  60
   61 ILPTFGSTTA FTTTANGVSY TSYTNNGA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IDATPISAYK TRPGIVSLDG DEPYSGSASG RKSKRSSGSA ADGSNGVKFK RPKPVYKNFV  60
   61 AGKELAFLPP SSSDPREVVE AVHMTFEALR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.39794
Match: 2e6sA
Description: No description for 2e6sA was found.

Predicted Domain #3
Region A:
Residues: [179-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRHLQLDEIQ ETSKRADLKA GAIMMASNIR ANVGKRVGLV PGVEIGDIFY FRMELCIIGL  60
   61 HAPSMGGIDY MSAKFGSDED SVAICIVAAG GYENVDDDTD TLVYSGSGGN SRNSEERHDQ 120
  121 KLERGNLALE RSLHRKNEIR VVRGFRDPFC LTGKIYIYDG LYKIQESWKE RTKSGINCFK 180
  181 YKLLREPGQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [368-672]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDGAALWKMT QGWIDNPASR GRVILPDLSS AAEALPVCLV NEVDHEKGPG HFTYASQVKY  60
   61 LRPLSSMKPL QGCGCQSVCL PGDPNCACGQ HNGGDLPYSS SGLLACRKPI IYECGDACHC 120
  121 TTNCRNRVTQ KGVRFHFEVF RTANRGWGLR CWDPIRAGAF ICEYTGEVID ELKVNLDDSE 180
  181 DDYIFQTVCP GEKTLKFNFG PELIGEESTY VSADEFEPLP IKISAKKMGN VSRFMNHSCS 240
  241 PNVFWQPVQH DHGDDSHPHI MFFALKHIPP MTELTFDYGV AGSESSGSRR TKNCFCGSSN 300
  301 CRGVF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.221849
Match: 2o8jA
Description: No description for 2o8jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle