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View Structure Prediction Details

Protein: gi|50931509, gi|...
Organism: Oryza sativa Japonica Group
Length: 581 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50931509, gi|....

Description E-value Query
Range
Subject
Range
gi|115441309, gi... - gi|56784222|dbj|BAD81717.1| putative lung alpha/beta hydrolase protein 1 [Oryza sativa Japonica Grou...
454.0 [0..8] [581..14]

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Predicted Domain #1
Region A:
Residues: [1-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNAAAGDSA AELLLRAAAL VPPAHYALAA LLLACALLYR FLELHLIGDL LRGLRGGRVA  60
   61 LTFHPASHVY HRVASKCRSL HGRYLATPWL ASPHLQTLFL SISGRPPSFT YRRQLYTVRD 120
  121 GGTIALDWLL ASDCEEEDVG FCDGVISRDD STPLVVVIPG LTSDSTAAYV KHLVFSMASK 180
  181 GWNVVVGNHR GLGGISITSD CFYNAGWTED FREIVNYLHQ KYPQAPLFAV GTSIGANILV 240
  241 KYLGEEGEGT PVAGAVSICS PWDLLVTNRF IQRKLVQRCY DKALAIGLKG YAKLHQPVLA 300
  301 RLANWEDIRK SRSIREFDRH ATCVVAKYET VDTFYRRCSS ANYISN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.69897
Match: 2o7rA
Description: No description for 2o7rA was found.

Predicted Domain #2
Region A:
Residues: [347-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSVPLLCISA LDDPLCTREA IPWDECRANK NIVLATAPNG GHLAFFQGLT AGKLWWVGAV  60
   61 SEFLLALHDS PCM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.221849
Match: 1zoiA
Description: No description for 1zoiA was found.

Predicted Domain #3
Region A:
Residues: [420-581]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HRQKAQEHSL HTSLESSIDK SPYVNFMEDG MVTAVTNDDA NNSDSDNPIS NEMELRNGMV  60
   61 GVQQDGIATE IQNECDGNRS QENVTPAQGP VGSQEQPKQN IDKIQDAIAP VKISINQLIR 120
  121 SQGRSVWLLT YIAFVTSWPF LGALGFILFR KKFRNSLPAK RL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle