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View Structure Prediction Details

Protein: IPK1_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 445 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPK1_ORYSJ.

Description E-value Query
Range
Subject
Range
gi|116310041 - gi|116310041|emb|CAH67064.1| H0112G12.9 [Oryza sativa (indica cultivar-group)]
559.0 [0..1] [445..1]

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Predicted Domain #1
Region A:
Residues: [1-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVVLHEGDA KDWVYKGEGA ANLILSYTGS SPSMLGKVLR VKKILKDKGQ PAPNCIVFSS  60
   61 HEEHLWGKIP GLLESVKNDC LPQAYATIVM SQHLGANHVD GGVRVRVSKN FFELAGKNVL 120
  121 DNRPAWRVNA SAIDAGADSA LLISDHTLFS GNPRGSSCIA VEIKAKCGFL PSSEYISKEN 180
  181 SIKKQVTRYK MHQHLKFHLG 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [201-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EISKTSEYDP LDLFSGSKER IHMAIKSFFS TPQNNFRIFV DGSLVFGGMG GGADSVHPNE  60
   61 TEKCLEDLSK VTGLQLSDFI ELLSEAIFKS GVLGKLLATQ KLDDH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [306-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIEGAIHLYY NIISQPCLVC KSITDTELLR KYSTLHSLPL DKSEKIVRDF LISATAKDCS  60
   61 LMISFRPRQS GTTDSEYDSV FLDSVNQSYD YKAYFIDLDV KPLDKMVHYF KLDQKIVNFY 120
  121 TRNGEVGGDP RDPPKGCGPR 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle