| Protein: | gi|38344883, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 724 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|38344883, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
394.0 | [0..7] | [723..10] |
|
|
389.0 | [0..1] | [724..1] |
|
|
362.0 | [0..11] | [722..1] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MFDSAHKAQY IDGQREMFKR LDESSPRSSV PSEVGGRSTL KFSMPSFGYD SFNPVRSFLS 60
61 GVRKGSGRLK SLRQSLTSGA PKTA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.863 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.704 | a.69.4 | Description not found. |
| View | Download | 0.653 | c.47.1 | Thioredoxin-like |
| View | Download | 0.601 | a.4.1 | Homeodomain-like |
| View | Download | 0.601 | a.4.1 | Homeodomain-like |
| View | Download | 0.598 | a.4.1 | Homeodomain-like |
| View | Download | 0.514 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.509 | a.74.1 | Cyclin-like |
| View | Download | 0.504 | a.42.1 | MDM2 |
|
Region A: Residues: [85-225] |
1 11 21 31 41 51
| | | | | |
1 FAEDLKSFKK TIFDPQEKFL FQMNWFCFLS CVFAVAVDPL FFFLPIIDGD DKSSCIGIDK 60
61 KLAVTSTIIR TILDLVYLIR VFLQFRTAYV APSSRVFGTG ELVIDPMRIA IRYLKSYFVM 120
121 DFFALLPLPQ IVVWRYLHTL D
|
| Detection Method: | |
| Confidence: | 1.56 |
| Match: | 2a0lA |
| Description: | Crystal structure of KvAP-33H1 Fv complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [226-435] |
1 11 21 31 41 51
| | | | | |
1 GPDVPSTKNA LVWVVLFQYI PRLLRIFPVT KDLKRTAGVF IETAWLGAAY YLLWFMLAGH 60
61 NVGTLWYFLT IEREDSCWRS NCHSNDGCNK SYLYCSDNHT GNYTSWLSKR TELLSACSTN 120
121 SFQFGIFEQA LVSGILRPGN FISKICYCFW WGLQNLSTLG QGLQTSIYPG EVLFSIAICV 180
181 IGLILFALLI GNMQTYLQSV AIRLEEMRVK
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [436-504] |
1 11 21 31 41 51
| | | | | |
1 KRDAEQWMHH RSLPPQIRER VRRYERYRWL ETRGVDEENL VQTLPKDLRR DIKRHLCLGL 60
61 VKRVPLFEN
|
| Detection Method: | |
| Confidence: | 2.34 |
| Match: | 2ptmA |
| Description: | No description for 2ptmA was found. |
|
Region A: Residues: [505-652] |
1 11 21 31 41 51
| | | | | |
1 MDERLLDAIC ERLRPTLYTE NEYILREGDP VDEMHFILHG CLESETTDGG RSGFFNKVQL 60
61 KEGAFCGDEL LTWALDPKSA ANFPASTRTV KALTEVEAFA LCAEELKFVA SQFRRLHSRQ 120
121 VQHTFRFYSQ HWRTWAACFI QAAWRRYY
|
| Detection Method: | |
| Confidence: | 17.30103 |
| Match: | 1wgpA |
| Description: | Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [653-724] |
1 11 21 31 41 51
| | | | | |
1 KRKMAEQHRK EEEAANRQSS SSHHPSLAAT IYASRFAANA LRGVHRLRSR ASPTIVRLPK 60
61 PPEPDFAVDE AD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.345 | a.7.14 | Description not found. |
| View | Download | 0.343 | d.68.6 | DNA-binding protein Sso10b (AlbA) |
| View | Download | 0.297 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.291 | a.64.1 | Saposin |
| View | Download | 0.291 | a.64.1 | Saposin |
| View | Download | 0.274 | a.46.3 | Description not found. |
| View | Download | 0.265 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.240 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.227 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
