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View Structure Prediction Details

Protein: gi|125592039, gi...
Organism: Oryza sativa Japonica Group
Length: 227 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125592039, gi....

Description E-value Query
Range
Subject
Range
gi|46129366, gi|... - gi|46129366|ref|XP_389044.1| hypothetical protein FG08868.1 [Gibberella zeae PH-1], gi|42549199|gb|E...
301.0 [0..1] [223..319]

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Predicted Domain #1
Region A:
Residues: [1-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGARVNLKG WQQAAVAFGS AFGALLDPRR ADLIAALGET TGKPAFQRVL QRMRNSAEGR  60
   61 DVLLERPRVI STQVSHAWDM PQNTFGAAYA QFMGSRNFSP DDRPPVRFMD TDELAYVATR 120
  121 AREVHDFWHV LFGLPTNLIG ETALKVIEFE QMFLPMCMLS VVGGSARFNE KQRTLFFQHY 180
  181 FPWASKAGLK CTDLMSVYYE KHFHEDLDEV RRNWGIIPCP DPKRSSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle