Protein: | MRE11_ORYSJ |
Organism: | Oryza sativa Japonica Group |
Length: | 705 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRE11_ORYSJ.
Description | E-value | Query Range |
Subject Range |
|
479.0 | [0..1] | [705..1] |
Region A: Residues: [1-397] |
1 11 21 31 41 51 | | | | | | 1 MGDESNTLRV LVATDCHLGY MEKDEIRRFD SFEAFEEICS LAEQNKVDFV LLGGDLFHEN 60 61 KPSRSTLVKT IEILRRYCLN DQPVKFQVVS DQTINFPNRF GQVNYEDPNF NVGLPVFTIH 120 121 GNHDDPAGVD NLSAIDILSA CNLVNYFGKM DLGGSGVGEI AVYPVLVKKG TTFVALYGLG 180 181 NIRDERLNRM FQTPHAVQWM RPETQDGMSV SDWFNILVLH QNRIKTNPKS AINEHFLPRF 240 241 LDFIVWGHEH ECLIDPQEVP GMGFHITQPG SSVATSLIDG EAKPKHVLLL EIKGNQYRPT 300 301 KIPLRSVRPF HYAEVVLKDE VDVDPNDQAS VLEHLDKIVR NLIKKSSQPT ASRPETKLPL 360 361 IRIKVDYSGF STINPQRFGQ KYVGKVANPQ DILIFSK |
Detection Method: | |
Confidence: | 42.09691 |
Match: | 1ii7A |
Description: | Mre11 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
catalytic activity | 0.868467185939998 | bayes_pls_golite062009 |
hydrolase activity | 0.63676719824861 | bayes_pls_golite062009 |
hydrolase activity, acting on ester bonds | 0.46273977460329 | bayes_pls_golite062009 |
phosphoric ester hydrolase activity | 0.30428003695269 | bayes_pls_golite062009 |
phosphatase activity | 0.12690085186887 | bayes_pls_golite062009 |
Region A: Residues: [398-564] |
1 11 21 31 41 51 | | | | | | 1 SAKKRQTTGV GNIDDSEKLR PEELNQQTIE ALVAENNLKM EILPVDDLDI ALHDFVSKDD 60 61 KMAFYACLQR NLEETRTKLN SEADKFKIEE EDIIVKVGEC MQERVKERSL RSKEDSRFTS 120 121 SSQNLDTGGR SVTAQSNLNS FSDDEDTREM LLGARTTNAG RKASGFT |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [565-705] |
1 11 21 31 41 51 | | | | | | 1 RPSKDATDVA KTGTSRRGRG RGTASMKQTT LNFSQSRSSA AIRSEEVQSS SDEENETNEA 60 61 NEVVESSEPE ESPQQTGRKR AAPRGGRGRG RGATAKRGRK ADISSIQSML MSKDDDDDDE 120 121 DDRPKKPPPR VTRNYGAVRR R |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.