| Protein: | gi|38346330, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 550 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|38346330, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
410.0 | [0..1] | [550..1] |
|
Region A: Residues: [1-230] |
1 11 21 31 41 51
| | | | | |
1 MTRIFVQRGA AGSSSSSSRS GSQTLQQQQQ LQATSAVARE EELPPQPHQH PSELTASDNI 60
61 TDHLVEDADN SSNSNKPLGL DDPTSESSSS AEERAVMEKP PKDDSSVIDP AFLVEELTGL 120
121 QFSDQFEQEN LVQSGIGPSQ IAGAASHPPP PPAPPAPPPK PSSGNNGLRR MGSGSSNNAR 180
181 IGSSRRPVAW PPVAVRSSAS GSRPSSPRSL ADSEGYNSAD EQGPCYASNY
|
| Detection Method: |  |
| Confidence: | 5.0 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [231-371] |
1 11 21 31 41 51
| | | | | |
1 YDSERERMFE HDLRRVRGFE INKMAEDGNC LFRAVADQVY GDPEAYDMAR QMCVDYMERE 60
61 RDHFSQFMTE GFTSYCRRKR RDKVYGNNME IQAFAEMYNR PIHIYSYSTE PINIFQGSYN 120
121 TDVPPIRLSY HHGNHYNSVV D
|
| Detection Method: | |
| Confidence: | 2.68 |
| Match: | 1tffA |
| Description: | Structure of Otubain-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.465394995609075 | bayes_pls_golite062009 |
|
Region A: Residues: [372-550] |
1 11 21 31 41 51
| | | | | |
1 PRGLTVGAGL GFSSLRGTNN VDRDQVKAAI KAQQDQQIEN ALLAEGRLYS DLELTEKEIE 60
61 RMVMEASRAE YLKQQQQQLN FRESSTSGAE PSSSAAISGS SRSAGTADRV GEECFVLPDT 120
121 VLTRSMQLLL AMGFNYIQVM EAYSIFGEDV DSMIYYLVEM GGTGASAGGS NRRKGKAAE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
