| Protein: | DUS3L_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 685 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DUS3L_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
529.0 | [0..32] | [685..32] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MAATAAAAAA APPADPPDSS PAASSPPRPS PEELVARAVA PVKPAFLRPP LSATPPKDEG 60
61 KANGGGAVVA EKKSKRQL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [79-160] |
1 11 21 31 41 51
| | | | | |
1 KRERKQEQKS SSHLCIEVGK SGNVSSCKYG DSCRFSHDID AYLAQKPADL EGTCPFTNLD 60
61 QLCPYGLTCR FLGTHKDIHA AS
|
| Detection Method: | |
| Confidence: | 17.39794 |
| Match: | 1rgoA |
| Description: | Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [161-241] |
1 11 21 31 41 51
| | | | | |
1 GNLSEKHEIN ALNKDIQKLL WKNKYKFPKA SAQIKLLGLK EVIKSKPDAA NDDKKVNHDN 60
61 LDGNDDENKE PLCNPPVNAE C
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [242-592] |
1 11 21 31 41 51
| | | | | |
1 DSTLCEELDR SEGEPLIDNS IPCVEPRPTK KSKVESDEID KHGAGTLNTN TESEDPNLSN 60
61 GLEPSNNSSS CRTDLITTPH LREKKIIDFR EKLYLAPLTT VGNLPFRRLC KTLGADITCG 120
121 EMAMCTNLLQ GQASEWALLR RHSSEDLFGV QICGAYPDTV ARTVELVDNE CSVDFIDINM 180
181 GCPIDIVVNK GAGSSLLTKP MRIKSIVQAA STVTEKPLTV KVRTAFFEGR NRADSIVSDI 240
241 YDWGASAITV HGRSRQQRYS KLADWDYIYQ CAQKAPDQLH VVGNGDVFSF TDWNKHVSGC 300
301 SKISTSMIAR GALIKPWIFT EVKEQRHWDI TSGERFNILK DFVSFGLEHW G
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 1goxA |
| Description: | REFINED STRUCTURE OF SPINACH GLYCOLATE OXIDASE AT 2 ANGSTROMS RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.94749091175302 | bayes_pls_golite062009 |
| tRNA dihydrouridine synthase activity | 1.94490879164338 | bayes_pls_golite062009 |
| nucleic acid binding | 1.03692680161964 | bayes_pls_golite062009 |
| binding | 0.68572942532795 | bayes_pls_golite062009 |
|
Region A: Residues: [593-685] |
1 11 21 31 41 51
| | | | | |
1 SDSKGVETTR YFLLEWLSYT CRYIPVGLLD VIPQRLNWRP PSYCGRDDLE TLMISDSAAD 60
61 WIRISEMLLG KVPEGFTFTP KHKSNAYDRA ENG
|
| Detection Method: | |
| Confidence: | 54.09691 |
| Match: | 1vhnA |
| Description: | Crystal structure of a putative flavin oxidoreductase with flavin |
Matching Structure (courtesy of the PDB): |
|
