YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: HS177_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 159 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HS177_ORYSJ.

Description E-value Query
Range
Subject
Range
HS17A_ORYSJ - 17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1
HSP23_ORYSA - 17.4 kDa class I heat shock protein 3 - Oryza sativa (Rice)
gi|125543232 - gi|125543232|gb|EAY89371.1| hypothetical protein OsI_10878 [Oryza sativa Indica Group]
174.0 [0..1] [159..1]

Back

Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLIRRGNAF DPFSLDLWDP VDGFPFGSGG SSSSSGSLFP RANSDAAAFA GARIDWKETP  60
   61 EVHVFKADVP GLKKEEVKVE VDDGNILQIS GERSREQEEK SDKWHRVERS SGKFLRRFRL 120
  121 PENTKPEQIK ASMENGVLTV TVPKEEPKKP DVKSIQISG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.69897
Match: 1gmeA
Description: Small heat shock protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle