| Protein: | gi|115451317, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 662 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115451317, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
490.0 | [0..1] | [662..1] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MPRAVSDGGE AIDADIASRT SSHSHMDGGH HHHHHGHKVE FPPKKKLIDE FTDAVKETFF 60
61 ADDPLRQYKD QPMSKKVLIS LQNFFPVLDW GRH
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [94-235] |
1 11 21 31 41 51
| | | | | |
1 YTFRKFRGDL VSGLTIASLC IPQDIGYAKL AGLLPNYGLY SSFVPPLIYA MMGSSRDIAI 60
61 GPVAVVSLLL GTLLQNEFDP KKNQEEYTRL AFTATFFAGV TQAALGFLRL GFIIEFLSHA 120
121 AIVGFMAGAA ITIALQQLKG FL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.544 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.515 | N/A | N/A | c.53.2 | beta-carbonic anhydrase, cab |
| View | Download | 0.504 | N/A | N/A | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.472 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.469 | N/A | N/A | a.63.1 | Apolipophorin-III |
|
Region A: Residues: [236-326] |
1 11 21 31 41 51
| | | | | |
1 GIANFTKKTD IISVMKSVWG NVHHGWNWQT ILIGASFLAF LLVAKYIAKK NKKLFWVAAI 60
61 APLTSVIIST LFVYITRADK HGVVIVKYIK K
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [327-510] |
1 11 21 31 41 51
| | | | | |
1 GINPPSASLI YFSGPNLMKG FRIGVIAGMI GLTEAIAIGR TFAGLKDYKI DGNKEMVALG 60
61 TMNIVGSMTS CYVATGSFSR SAVNYMAGCQ TAVSNIVMSI VVLLTLELIT PLFKYTPNAI 120
121 LSSIIISAVL GLVDYHTAYL IWKVDKLDFL ACLGAFFGVI FSSVEYGLLI AVAISLAKIL 180
181 LQVT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [511-662] |
1 11 21 31 41 51
| | | | | |
1 RPRTVLLGNL PRTTLYRNID QYPEATLVPG VVIVRVDSAI YFTNSNYVKD RILRWLRDEE 60
61 ERQQEQKLQK TEFLIVELSP VIDIDTSGIH ALEDLFRALE KRKIQLILAN PGPAVILKLR 120
121 SAKFTDLIGE DKIFLTVGDA VKKFAPKAVE NV
|
| Detection Method: | |
| Confidence: | 6.69897 |
| Match: | 1sboA |
| Description: | Solution Structure of putative anti sigma factor antagonist from Thermotoga maritima (TM1442) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.9933616198208 | bayes_pls_golite062009 |
| protein binding | 1.73254574073085 | bayes_pls_golite062009 |
