| Protein: | gi|108711930, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 725 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108711930, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
610.0 | [0..1] | [690..1] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MARKGSQSKS VLNHASPNRQ NAANCEVLNT PESDVMDGEN RSSHVQGGSN VSGVNYGQKT 60
61 KGIKKNNRSN GISSSGKSDD RASKKQSVDT NYDIGNSGEN DNELSS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [107-335] |
1 11 21 31 41 51
| | | | | |
1 STSKARRDSK RSSRRGCGKN SSIEQTPMPV FAEKVLEKTR CIACMAASIF RASVMYIIEE 60
61 SKLLLERNRP AITTFMAIVH KGHDYVRSKI KYTYPICRAW MFSAGKLILL LLAVWFNCNI 120
121 RGFDSLLRLG TNSLLTVLWC STLSVFAMIG LKKMLILMVI AAAVVAFVGL GFAVLVIAVA 180
181 AVVILWLYGS FWTTSGIIIL GGASFFLKHE RFALLVTCLY SMYCAKNYV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [336-431] |
1 11 21 31 41 51
| | | | | |
1 GWLGLLLSLN LSFISSDVLV QLLKNNVDNN KSAGSSRNSE QNSGKSGFFG EFRQSSADNT 60
61 SQSEYAQPSD RGPGDPSTSG AEKELTSEDE VSRLLN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [432-519] |
1 11 21 31 41 51
| | | | | |
1 CTDHYSALGF HRYENIDVSL LKREYKKKAM LVHPDKNMGN DKAADAFKKL QNAYEVLLDS 60
61 LKRKTYDDEL RREELLNYFR RFQSASQK
|
| Detection Method: | |
| Confidence: | 22.522879 |
| Match: | 1bq0A |
| Description: | J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [520-725] |
1 11 21 31 41 51
| | | | | |
1 KGGSGIFRQG FSPSEGVDEG PYGLSRRIAC KKCGDFHLWI YTGRAKSQAR WCQDCNDFHQ 60
61 AKDGDGWVEQ SFQPVLFGLL HKPELPHAYV CAESIIFDVT EWFTCQGMRC PANTHKPSFH 120
121 VNASLLKQNS GKGSTSAQRG GGIPNGVNMD GGIDEEEFFE WLQNALQSGM FESFGAQNEP 180
181 PSPGSGSNAK GSNSSSKKKK KGKKQW
|
| Detection Method: | |
| Confidence: | 34.221849 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.036672061154828 | bayes_pls_golite062009 |
