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View Structure Prediction Details

Protein: MTP3_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 410 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTP3_ORYSJ.

Description E-value Query
Range
Subject
Range
gi|115451677, gi... - gi|115451677|ref|NP_001049439.1| Os03g0226400 [Oryza sativa (japonica cultivar-group)], gi|113547910...
288.0 [0..10] [410..47]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGDDRRTPL LGGEGGSTRP PSLRRRDSAR SLRSTFLSRL PDKVRGGGDP ERPAADVDLT  60
   61 RAKGLSQGEK EYYEKQLATL KIFEEVEALC MP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.221849
Match: 2enkA
Description: No description for 2enkA was found.

Predicted Domain #2
Region A:
Residues: [93-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEFESDAEVL ELEDKEQKQS ESAMKISNYA NIILLVFKVY ATIKTGSMAI AASTLDSLLD  60
   61 FLAGGILYFT HLTMKSVNIY KYPIGKLRVQ PVGIIVFAAI MATLGFQVLI QAIEQLVENK 120
  121 AGEKMTPEQL IWLYSIMLSA TVVKLALYIY CRSSGNSIVQ AYAKDHYFDV VTNVVGLVAA 180
  181 VLGDKFFWWI DPVGAVLLAV YTIVNWSGTV YENAVTLVGQ CAPSDMLQKL TYLAMKHDPR 240
  241 VRRVDTVRAY SFGALYFVEV DIELSEDMRL GEAHSIGESL QDKIEKLPEV ERAFVHVDFE 300
  301 STHKPEHRVR SRLPSTEP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.522879
Match: 2qfiA
Description: No description for 2qfiA was found.

Predicted functions:

Term Confidence Notes
cation transmembrane transporter activity 4.5307404935943 bayes_pls_golite062009
ion transmembrane transporter activity 4.4634224995221 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 4.1916987544196 bayes_pls_golite062009
transporter activity 2.72282838578572 bayes_pls_golite062009
transmembrane transporter activity 2.61155472577391 bayes_pls_golite062009
substrate-specific transporter activity 2.37288341875523 bayes_pls_golite062009
efflux transmembrane transporter activity 1.43383523050563 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 0.253156897715141 bayes_pls_golite062009
binding 0.112542057149574 bayes_pls_golite062009
metal ion transmembrane transporter activity 0.0523266677042269 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle