| Protein: | gi|113537715, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 607 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113537715, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
423.0 | [0..1] | [605..1] |
|
Region A: Residues: [1-206] |
1 11 21 31 41 51
| | | | | |
1 MASLKELLPT PKAAASTFYD HSSDPWFKER YGGESAQSDA AAAAAKPSGP AKPVPPYGKR 60
61 GGFVPRRPED FGDGGAFPEI HVAQYPLGMG RRDEKGGSKI LALTVDAKGS VAFDAVVKQG 120
121 ENASKIVYSK HSDLVPKIAT ADSEATADDE EYQKQIEETT ERTKAALEKV VNVRLSAAQP 180
181 KNVPTHDSES KFIKYKPSQQ SAAFNS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [207-299] |
1 11 21 31 41 51
| | | | | |
1 GAKERIIRMS EMAQDPLEPP KFKHKRVPRA SGSPPVPVMH SPPRPVTVKD QQDWKIPPCI 60
61 SNWKNPKGYT IPLDKRLAAD GRGLQEVQIN DNF
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [300-607] |
1 11 21 31 41 51
| | | | | |
1 AKLSEALYVA EQKAREAVQM RSKVQRELQL KEKERKEQEL RALAQKARME RTGAPPAPTG 60
61 VPAGGGRGAV DDREEDMDLE QPREQRRESR EEREARIERD RIREERRRER ERERRLEARD 120
121 AAMGKKSKLT RDRDRDVSEK IALGMASTGG AKGGEVMYDQ RLFNQDKGMD SGFATDDQYN 180
181 IYSKGLFTAQ PTLSTLYRPK KDGDSDVYGD ADEQLEKVMK TDRFKPDKGF SGASERSGKR 240
241 DRPVEFDKQE ENDPFGLDQF LTEVKKGKKA VEKIGSGGAM RASGGSSMRD DYEGGGSGRS 300
301 RINFERGR
|
| Detection Method: | |
| Confidence: | 12.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
