| Protein: | gi|46390620, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 396 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46390620, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
237.0 | [0..54] | [396..81] |
|
|
199.0 | [0..38] | [387..15] |
|
|
172.0 | [0..8] | [372..6] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MVAAVAASLR SLAPLSAYRS PSHGIHAVVR DSSAYTTRPP PPPPTADGGG NGGRISPAVL 60
61 FIIVILAVIF FISGLLHLLV RLLMKKQHRR GGAENAAPSP HSRHVGRDAA MDRQLQQLFH 120
121 LHDSGLDQAF IDALPVFAYR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [141-207] |
1 11 21 31 41 51
| | | | | |
1 DIVGGDKEPF DCAVCLCEFD GEDRLRLLPV CGHAFHLHCI DTWLLSNSTC PLCRGTLYVP 60
61 GLTIESL
|
| Detection Method: | |
| Confidence: | 15.221849 |
| Match: | 1iymA |
| Description: | EL5 RING-H2 domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [208-279] |
1 11 21 31 41 51
| | | | | |
1 MFDFDERLEE GRLSEECEDG FQSSRQKKPM DEEQTVTEKR VFPVRLGKFK NVGNTGVGGV 60
61 DNGNAAGIVS RE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.271 | d.76.1 | GYF domain |
| View | Download | 0.259 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.236 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.219 | b.3.2 | Carboxypeptidase D, a regulatory domain |
| View | Download | 0.206 | c.47.1 | Thioredoxin-like |
|
Region A: Residues: [280-396] |
1 11 21 31 41 51
| | | | | |
1 PGESSSSSLD TRRCFSMGTY QYVLGASELR VALQPGRNKN GVGSRLKGRA TGISSVNAEI 60
61 MEGKRICAKS KGESFSMSKI WQWSNVKGKL PAGSDNCSET ASFPWMKRDA TGDKSNM
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
