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View Structure Prediction Details

Protein: gi|50725768, gi|...
Organism: Oryza sativa Japonica Group
Length: 101 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50725768, gi|....

Description E-value Query
Range
Subject
Range
gi|73954359 - gi|73954359|ref|XP_536425.2| PREDICTED: similar to Activated RNA polymerase II transcriptional coact...
132.0 [0..3] [100..215]

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Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRKGNKRFG GGGEPAAKRR AAGDDGPSES ADDDIVVAQI SKNRRVAVRT WNGKVVVDIR  60
   61 EFYEKDGKTL PGRKGIQLPM DQWKILRDNI KAIDEAIKEN A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.30103
Match: 1pcfA
Description: Transcriptional coactivator PC4 C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle