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View Structure Prediction Details

Protein: gi|50906493, gi|...
Organism: Oryza sativa Japonica Group
Length: 348 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50906493, gi|....

Description E-value Query
Range
Subject
Range
gi|218198389 - gi|218198389|gb|EEC80816.1| hypothetical protein OsI_23388 [Oryza sativa Indica Group]
gi|53791808, gi|... - gi|53791808|dbj|BAD53753.1| putative SF21C1 protein [Oryza sativa Japonica Group], gi|215704620|dbj|...
218.0 [0..1] [348..1]

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Predicted Domain #1
Region A:
Residues: [1-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDSGGSVVS IDVERISFGG KEHHIHTNHG PVSVAVYGDH DKPALVTYPD IALNHMSCFQ  60
   61 GLLFCPEAAS LLLHNFCIYH ISPPGHELGA APISPNAPIP SVDDLADQVA DVLDFFGLGS 120
  121 VMCLGVSAGA YILTLFAAKY RDRVLGLILV SPLCKPPTWT EWFYNKVASN LLYYYGMCGL 180
  181 VKEGLLQRYF SKEVRGCSDL PESDIVQACR SLLDQRQSMN VWRFVQTMNM RYDLTEDLKQ 240
  241 LQCRTLIFVG EYSQFHTEAV HMTSKLDRRY CALVEVQACG SLITEEQPHA MLIPMEYFFM 300
  301 GYGLYRPSQL DCSPRSPLSP FCISPDLLSP ESMGVKLKPI KTRVRLEV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.522879
Match: 2qmqA
Description: No description for 2qmqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle