YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|34102396, gi\|...
Organism:	Chromobacterium violaceum ATCC 12472
Length:	64 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34102396, gi|....

Description	E-value	Query Range	Subject Range
gi\|33573350 - gi\|33573350\|emb\|CAE37334.1\| conserved hypothetical protein [Bordetella parapertussis] gi\|33596649 - gi\|33596649\|ref\|NP_884292.1\| hypothetical protein BPP2034 [Bordetella parapertussis 12822] gi\|33601265, gi\|... - gi\|33601265\|ref\|NP_888825.1\| hypothetical protein BB2282 [Bordetella bronchiseptica RB50], gi\|335757... gi\|33572515, gi\|... - gi\|33592867\|ref\|NP_880511.1\| hypothetical protein BP1805 [Bordetella pertussis Tohama I], gi\|3357251...	108.0	[0..1]	[64..1]

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Predicted Domain #1

Region A:
Residues: [1-64]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWTDVNDIA IELADAHPDV DPKTVRFVDL HNWVVELPGF DDDHARGGER VLEAIQQAWI  60
   61 DEAE

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Detection Method:	PSI-BLAST
Confidence:	22.69897
Match:	2bztA
Description:	No description for 2bztA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

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Top Sequence Alignment Hits